Liste des publications

LISTE DES PUBLICATIONS
Articles publiés dans des revues avec comité de lecture :
1) Rahmouni, A. , Malinge, J-M, Schwartz, A. and Leng, M.
Comparison Between poly(dG-dC).poly(dG-dC) and DNA Modified
by cis-diamminedichloroplatinium (II): Immunological and Spectroscopic Studies.
J. Biomol. Structure and Dynamics (1985) 3, 363-375.
2) Rahmouni, A. and Leng, M.
Reaction of Nucleic Acids with cis-diamminedichloroplatinum (II): Interstrand Cross-Links.
Biochemistry (1987) 26, 7229-7234.
3) Rahmouni, A., Schwartz, A. and Leng, M.
Importance of DNA Sequence in the Reaction of d(ApG) and d(GpA) with
cis-diamminedichloroplatinum (II).
In: Platinum and other Metal Coordination Compounds in Cancer Chemotherapy,
Martinus Nighoff-Publishing, Boston, MA (1988) p. 127-131.
4) Nandi, R., Vogt, N., Rahmouni, A., Malfoy, B. and Leng, M.
Antibodies to unusual DNA structures.
J. Indian Inst. Sci. (1989) 69, 3-11.
5) Ptak, M., Rahmouni, A., Mazeau, K., Thuong, N.T. and Leng, M.
Structure of the Intrastrand cis-Pt d(GpCpG) adduct in a Dodecanucleotide Duplex:
I. A 1H and 31P NMR Study. Anti-Cancer Drug Design (1989) 4, 53-61.
6) Mazeau, K., Vovelle, F., Ptak, M., Rahmouni, A. and Leng, M.
Structure of the Intrastrand cis-Pt d(GpCpG) adduct in a Dodecanucleotide Duplex:
II. A Molecular Mechanics Modeling Study. Anti-Cancer Drug Design (1989) 4, 63-78.
7) Rahmouni, A.R. and Wells, R.D.
Stabilisation of Z-DNA in Vivo by Localized Supercoiling.
Science (1989) 246, 358-363. (Research Article)
8) Rajagopalan, M., Rahmouni, A.R. and Wells, R.D.
Flanking AT-rich Tracts Cause a Structural Distortion in Z-DNA in Plasmids.
J. Biol. Chem. (1990) 265, 17294-17299.
9) Lemaire, M.-A., Schwartz, A., Rahmouni, A.R. and Leng, M.
Interstrand cross-links are preferentially formed at the d(GC) sites in the reaction between cis-
diamminedichloro-platinum(II) and DNA. Proc. Natl. Acad. Sci. USA (1991) 88, 1982-1985.
10) Rahmouni, A.R. and Wells, R.D.
Direct Evidence for the Effect of Transcription on Local DNA Supercoiling in Vivo.
J. Mol. Biol. (1992) 223, 131-144.
11) Rahmouni, A. R.
Z-DNA as a Probe for Localized Supercoiling in Vivo.
Mol. Microbiol. (1992) 6, 569-572.
12) Albert, A-C., Roman, A-M., Bouche, G., Leng, M. and Rahmouni, A. R.
Gradual and Oriented B-Z Transition in 5'-Untranscribed Region of Mouse Ribosomal DNA.
J. Biol. Chem. (1994) 269, 19238-19244.
13) Tartier, L., Michalik, V., Spotheim-Maurizot, M., Rahmouni, A. R., Sabatier, R. and
Charlier, M.
Radiolytic Signature of Z-DNA. Nucleic Acids Res. (1994) 22, 5565-5570.
14) Albert, A-C., Leng, M. and Rahmouni, A. R.
The Size of the Topological Domain Modulates the B-Z Transition of a (TG)n containing
repeat. J. Biomol. Structure and Dynamics (1995) 13, 1-9.
15) Albert, A-C., Spirito, F., Figueroa-Bossi, N., Bossi, L. and Rahmouni, A. R.
Hyper-negative template DNA supercoiling during transcription of the tetracycline-resistance
gene in topA mutants is largely constrained in vivo. Nucleic Acids Res. (1996) 24, 3093-3099.
16) Guérin, M., Leng, M. and Rahmouni, A. R.
High resolution mapping of E. coli transcription elongation complex in situ reveals protein
interactions with the nontranscribed strand. EMBO J. (1996) 15, 5397-5407.
17) Guérin, M., Robichon, N., Geiselmann, J. and Rahmouni, A. R.
A simple polypyrimidine repeat acts as an artificial rho-dependent terminator
in vivo and in vitro. Nucleic Acids Res. (1998) 26, 4895-4900.
18) Figueroa-Bossi, N, Guérin, M., Rahmouni, R., Leng, M. and Bossi, L.
The supercoiling sensitivity of a bacterial tRNA promoter parallels its responsiveness to
stringent control. EMBO J. (1998) 17, 2359-2367.
19) Toulmé, F., Guérin, M., Robichon, N., Leng, M. and Rahmouni, A. R.
In vivo evidence for back and forth oscillations of the transcription elongation complex.
EMBO J. (1999) 18, 5052-5060.
20) Toulmé, F., Mosrin-Huaman, C., Sparkowski, J., Das, A., Leng, M.and Rahmouni, A.R.
GreA and GreB proteins revive backtracked RNA polymerase in vivo by promoting transcript
trimming. EMBO J. (2000) 19, 6853-6859.
21) Boudvillain, M., Schwartz, A. and Rahmouni A. R.
Limited topological alteration of T7 RNA polymerase active-center at intrinsic termination
sites. Biochemistry (2002) 41, 3137-3146.
22) Schwartz, A., Rahmouni, A. R. and Boudvillain, M.
The functional anatomy of an intrinsic transcription terminator. EMBO J. (2003) 22, 3385-
3394.
23) Epshtein, V., Toulmé, F., Rahmouni, A. R., Borukhov, S. and Nudler, E.
Transcription through the roadblocks: the role of RNA polymerase cooperation. EMBO J.
(2003) 22, 4719-4727.
24) Mosrin-Huaman, C., Turnbough, C. L. and Rahmouni, A. R.
Translocation of Escherichia coli RNA polymerase against a protein roadblock in vivo
highlights a passive sliding mechanism for transcript elongation. (2004) Mol. Microbiol. 51,
1471-1481.
25) Vieu, E. and Rahmouni, A. R.
Dual role of boxB RNA motif in the mechanisms of termination/antitermination at the lambda
tR1 terminator revealed in vivo. (2004) J. Mol. Biol. 339, 1077-1087.
26) Walmacq, C., Rahmouni, A. R. and Boudvillain, M.
Influence of substrate composition on the helicase activity of transcription termination factor
Rho: reduced processivity of Rho hexamers during unwinding of RNA-DNA hybrid regions.
(2004) J. Mol. Biol. 342, 403-420.
27) Moulin, L., Rahmouni, A. R. and Boccard, F.
Topological insulators inhibit diffusion of transcription-induced positive supercoils in the
chromosome of Escherichia coli. (2005) Mol. Microbiol. 55, 601-610.
28) Toulmé, F., Mosrin-Huaman, C., Artsimovitch, I. and Rahmouni, A. R.
Transcriptional pausing in vivo: a nascent RNA hairpin restricts lateral movements of RNA
polymerase in both forward and reverse directions. (2005) J. Mol. Biol. 351, 39-51.
29) Walmacq, C., Rahmouni, A. R. and Boudvillain, M.
Testing the steric exclusion model for hexameric helicases : substrate features that alter RNA-
DNA unwinding by the transcription termination factor Rho. (2006) Biochemistry 45, 5885-
5895.
30) Schwartz, A., Walmacq, C., Rahmouni, A. R. and Boudvillain, M.
Noncanonical interactions in the management of RNA structural blocks by the transcription
termination Rho helicase. (2007) Biochemistry 46, 9366-9379.

31) Nagarajavel, V., Madhusudan, S., Dole, S., Rahmouni, A.R. and Schnetz, K.
Repression by Binding of H-NS within the Transcription Unit. (2007) J. Biol. Chem. 282,
23622-23630.
32) Schwartz, A., Margeat, E., Rahmouni, A.R. and Boudvillain, M.
Transcription termination factor Rho can displace streptavidin from biotinylated transcript
substrates. (2007) J. Biol. Chem. 282, 31469-31476.
33) Mosrin-Huaman, C, Honorine R, and Rahmouni, A.R. Expression of bacterial Rho factor
in yeast identifies new factors involved in the functional interplay between transcription and
mRNP biogenesis. (2009) Mol. Cell. Biol. 29, 4033-4044.
34) Schwartz, A, Rabhi, M., Jacquinot, F., Margeat, E., Rahmouni, A.R. and Boudvillain, M.
A stepwise 2'-hydroxyl activation mechanism for the ring-shaped transcription termination Rho
helicase. (2009) Nat. Struct. Mol. Biol. 16, 1309-1316.
35) Proshkin, S., Rahmouni A. R., Mironov, A. & Nudler, E. Cooperation between
Translating Ribosomes and RNA Polymerase in Transcription Elongation. (2010) Science.
328, 504-508.
36) Honorine, R., Mosrin-Huaman, C., Hervouet-Coste, N., Libri, D. & Rahmouni A. R.
Nuclear mRNA quality control in yeast is mediated by Nrd1 co-transcriptional recruitment
(2011) Nucleic Acids Res. 39, 2809-2820.
37) Rabhi, M., Espéli, O., Schwartz, A., Cayrol, B., Rahmouni, A.R., Arluison, V. &
Boudvillain, M. The Sm-like RNA chaperone Hfq mediates transcription antitermination at
Rho-dependent terminators (2011) EMBO J. 30, 2805-2816.
38) Stuparevic, I., Mosrin-Huaman, C., Hervouet-Coste, N., Remenaric M. & Rahmouni A. R.
Co−transcriptional recruitment of Rrp47p, Mpp6p and two distinct TRAMP complexes assists Rrp6p
in the targeting and degradation of aberrant mRNPs
Nucleic Acids Res. (en révision).
Chapitres de livres:
1) Wells, R.D., Amirhaeri, S., Blaho, J.A., Collier, D.A., Dohrman, A., Griffin, J.A., Hanvey,
J.C., Hsieh, W.-T., Jaworski, A., Larson, J.E., McLean, M.J., Rahmouni, A.R., Rajagopalan,
M., Shimizu, M., Wohlrab, F. and Zacharias, W.
Biology and Chemistry of Z-DNA and Triplexes In: The Bacterial Chromosome, Drlica, K.
and Riley, M. Eds, American Society for Microbiology, Washington DC (1990) p 187-194.
2) Wells, R.D., Amirhaeri, S., Blaho, J.A., Collier, D.A., Hanvey, J.C., Jaworski, A., Larson,
J.E, Rahmouni, A.R., Rajagopalan, M., Shimizu, M., Wohlrab, F. and Zacharias, W.
Left-Handed Z-DNA In Vivo. In: Structure and Methods, Sarma, R.H. and Sarma, M.H., Eds,
Adenine Press (1990) 2, 25-31.
3) Wells, R.D., Amirhaeri, S., Blaho, J.A., Collier, D.A., Hanvey, J.C., Hsieh, W.-T.,
Jaworski, A., Larson, J.E., Rahmouni, A.R., Rajagopalan, M., Shimizu, M., Wohlrab, F. and
Zacharias, W.
Z-DNA and Triplexes. In: Molecular Mechanisms in DNA Replication and Recombination,
Richardson, C.C. and Lehman, I.R. Eds, Wiley-Liss, New York NY, (1990) p 79-91.
4) Rahmouni, A. R. Guérin, M. et Leng, M.
Structure dynamique du complexe d’élongation de la transcription.
Les Cahiers IMABIO (1997) 19, 65-69.
5) Rabhi, M., Rahmouni, A. R. & M. Boudvillain, M.
Transcription termination factor Rho: a ring-shaped RNA helicase from bacteria: in RNA
helicases, E. Jankowsky, Editor. RSC Publishing: Cambridge (UK). (2010) p. 243-271.

Source: http://cbm.cnrs-orleans.fr/IMG/pdf/rahmouni_liste_publications-2.pdf